Note
Go to the end to download the full example code.
Inverse Distance Verification: Cressman and Barnes#
Compare inverse distance interpolation methods
Two popular interpolation schemes that use inverse distance weighting of observations are the Barnes and Cressman analyses. The Cressman analysis is relatively straightforward and uses the ratio between distance of an observation from a grid cell and the maximum allowable distance to calculate the relative importance of an observation for calculating an interpolation value. Barnes uses the inverse exponential ratio of each distance between an observation and a grid cell and the average spacing of the observations over the domain.
Algorithmically:
A KDTree data structure is built using the locations of each observation.
All observations within a maximum allowable distance of a particular grid cell are found in O(log n) time.
Using the weighting rules for Cressman or Barnes analyses, the observations are given a proportional value, primarily based on their distance from the grid cell.
The sum of these proportional values is calculated and this value is used as the interpolated value.
Steps 2 through 4 are repeated for each grid cell.
import matplotlib.pyplot as plt
import numpy as np
from scipy.spatial import cKDTree
from metpy.interpolate.geometry import dist_2
from metpy.interpolate.points import barnes_point, cressman_point
from metpy.interpolate.tools import average_spacing, calc_kappa
def draw_circle(ax, x, y, r, m, label):
th = np.linspace(0, 2 * np.pi, 100)
nx = x + r * np.cos(th)
ny = y + r * np.sin(th)
ax.plot(nx, ny, m, label=label)
Generate random x and y coordinates, and observation values proportional to x * y.
Set up two test grid locations at (30, 30) and (60, 60).
Set up a cKDTree object and query all the observations within “radius” of each grid point.
The variable indices represents the index of each matched coordinate within the
cKDTree’s data list.
grid_points = np.array(list(zip(sim_gridx, sim_gridy)))
radius = 40
obs_tree = cKDTree(list(zip(xp, yp)))
indices = obs_tree.query_ball_point(grid_points, r=radius)
For grid 0, we will use Cressman to interpolate its value.
For grid 1, we will use barnes to interpolate its value.
We need to calculate kappa–the average distance between observations over the domain.
x2, y2 = obs_tree.data[indices[1]].T
barnes_dist = dist_2(sim_gridx[1], sim_gridy[1], x2, y2)
barnes_obs = zp[indices[1]]
kappa = calc_kappa(average_spacing(list(zip(xp, yp))))
barnes_val = barnes_point(barnes_dist, barnes_obs, kappa)
Plot all of the affiliated information and interpolation values.
fig, ax = plt.subplots(1, 1, figsize=(15, 10))
for i, zval in enumerate(zp):
ax.plot(pts[i, 0], pts[i, 1], '.')
ax.annotate(str(zval) + ' F', xy=(pts[i, 0] + 2, pts[i, 1]))
ax.plot(sim_gridx, sim_gridy, '+', markersize=10)
ax.plot(x1, y1, 'ko', fillstyle='none', markersize=10, label='grid 0 matches')
ax.plot(x2, y2, 'ks', fillstyle='none', markersize=10, label='grid 1 matches')
draw_circle(ax, sim_gridx[0], sim_gridy[0], m='k-', r=radius, label='grid 0 radius')
draw_circle(ax, sim_gridx[1], sim_gridy[1], m='b-', r=radius, label='grid 1 radius')
ax.annotate(f'grid 0: cressman {cress_val:.3f}', xy=(sim_gridx[0] + 2, sim_gridy[0]))
ax.annotate(f'grid 1: barnes {barnes_val:.3f}', xy=(sim_gridx[1] + 2, sim_gridy[1]))
ax.set_aspect('equal', 'datalim')
ax.legend()
<matplotlib.legend.Legend object at 0x7f045472eb10>
For each point, we will do a manual check of the interpolation values by doing a step by step and visual breakdown.
Plot the grid point, observations within radius of the grid point, their locations, and their distances from the grid point.
fig, ax = plt.subplots(1, 1, figsize=(15, 10))
ax.annotate(f'grid 0: ({sim_gridx[0]}, {sim_gridy[0]})', xy=(sim_gridx[0] + 2, sim_gridy[0]))
ax.plot(sim_gridx[0], sim_gridy[0], '+', markersize=10)
mx, my = obs_tree.data[indices[0]].T
mz = zp[indices[0]]
for x, y, z in zip(mx, my, mz):
d = np.sqrt((sim_gridx[0] - x)**2 + (y - sim_gridy[0])**2)
ax.plot([sim_gridx[0], x], [sim_gridy[0], y], '--')
xave = np.mean([sim_gridx[0], x])
yave = np.mean([sim_gridy[0], y])
ax.annotate(f'distance: {d}', xy=(xave, yave))
ax.annotate(f'({x}, {y}) : {z} F', xy=(x, y))
ax.set_xlim(0, 80)
ax.set_ylim(0, 80)
ax.set_aspect('equal', 'datalim')
Step through the Cressman calculations.
dists = np.array([22.803508502, 7.21110255093, 31.304951685, 33.5410196625])
values = np.array([0.064, 1.156, 3.364, 0.225])
cres_weights = (radius**2 - dists**2) / (radius**2 + dists**2)
total_weights = np.sum(cres_weights)
proportion = cres_weights / total_weights
value = values * proportion
val = cressman_point(cress_dist, cress_obs, radius)
print('Manual cressman value for grid 1:\t', np.sum(value))
print('Metpy cressman value for grid 1:\t', val)
Manual cressman value for grid 1: 1.0549944440419021
Metpy cressman value for grid 1: 1.0549944440416752
Now repeat for grid 1, except use Barnes interpolation.
fig, ax = plt.subplots(1, 1, figsize=(15, 10))
ax.annotate(f'grid 1: ({sim_gridx[1]}, {sim_gridy[1]})', xy=(sim_gridx[1] + 2, sim_gridy[1]))
ax.plot(sim_gridx[1], sim_gridy[1], '+', markersize=10)
mx, my = obs_tree.data[indices[1]].T
mz = zp[indices[1]]
for x, y, z in zip(mx, my, mz):
d = np.sqrt((sim_gridx[1] - x)**2 + (y - sim_gridy[1])**2)
ax.plot([sim_gridx[1], x], [sim_gridy[1], y], '--')
xave = np.mean([sim_gridx[1], x])
yave = np.mean([sim_gridy[1], y])
ax.annotate(f'distance: {d}', xy=(xave, yave))
ax.annotate(f'({x}, {y}) : {z} F', xy=(x, y))
ax.set_xlim(40, 80)
ax.set_ylim(40, 100)
ax.set_aspect('equal', 'datalim')
Step through barnes calculations.
dists = np.array([9.21954445729, 22.4722050542, 27.892651362, 38.8329756779])
values = np.array([2.809, 6.241, 4.489, 2.704])
weights = np.exp(-dists**2 / kappa)
total_weights = np.sum(weights)
value = np.sum(values * (weights / total_weights))
print('Manual barnes value:\t', value)
print('Metpy barnes value:\t', barnes_point(barnes_dist, barnes_obs, kappa))
plt.show()
Manual barnes value: 4.112066483189193
Metpy barnes value: 4.112066483188547
Total running time of the script: (0 minutes 0.336 seconds)